PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT60713.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 768aa    MW: 83185 Da    PI: 5.9771
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT60713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS336.25.7e-1034077672374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 +++L+++Ae v++g+  laq +Larl+++ sp g+p+ R+a++ +eAL+  l+ ++++l +++++s+    + + ++ a+k fse+sP+ +f+++t+Nq
  PHT60713.1 407 IDQLFKAAELVQTGNPVLAQGILARLNHQLSPIGKPFYRAAFHCKEALQLLLHANTNNLNASMASSSPF--TLIFKIGAYKSFSEISPVAQFANFTCNQ 503
                 689***************************************************999999988555544..5*************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL..rvk 197
                 a+le ++g er+Hi+Dfdi++G+QW++L+q+La R++g+p+l+iT+++sp+++++ el  t+e+L +fA+e+++ fef++l  ++l++   ++L   ++
  PHT60713.1 504 ALLEVLDGFERIHIVDFDIGYGGQWASLMQELALRSGGAPTLKITALASPSTHDQLELGLTRENLIHFASEINMAFEFEILSIDSLNST-SWSLppLIS 601
                 ********************************************************************************966666655.444533477 PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++Ea+aVnl ++  + +  ++sl+     vL++vk+lsP++vv v++ +d+++ +F +++++al+ ys l++sl+a    + ++ +k+Er+l+++ i+ 
  PHT60713.1 602 ENEAIAVNLPVSSLSSY--QLSLPL----VLRFVKQLSPRIVVSVDRGCDRTDLPFPNHVIQALQSYSNLLESLDAV-NVNFDALQKIERFLVQPGIER 693
                 7**********877776..555555....*********************************************665.3466999************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +v+ + ++     e+ ++Wr  + ++GF+p++ls+++++qa++++++++++g++ve+++ slvl+W++++L+s+SaWr
  PHT60713.1 694 IVMGRFRS----PEKTQHWRTLFLSSGFSPLSLSNFTESQAECVVKRTPVRGFHVEKRQSSLVLCWQRKELISASAWR 767
                 **998877....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 768 aa     Download sequence    
MKGMPLPFGF EGKGVLELDV LFNKNTSILN SWNHNNNSKE SCYLVNSPSA VLDTIRSPRP  60
ITSSSTLSSS LGDGGGGGGG GGTASTDTAG GGVAAVSANP SSKWRQQDNT TATSSNVGGA  120
ESELQQVQTP SLEMGSAAAA AAATGGEKCA MEEWEGGLSE SVMASPCQEQ SILRWIMGDV  180
DDPSMANLNR VLQVSGPGDY EFNGGFGVVD QGFGVDPVGQ IGSFMPAISS SSSFPNTRMN  240
SDKIGLVSNP PPPANLLQNP IFPSLSNNLG PIAFGQTQQQ PFESTDLKPH SFNSQFLINQ  300
HQTQIPQNPS FLLPLPFGQQ EQNLVLPPQA KRHNPGLEPG SQISKGLFLD AGHQQQPTPP  360
QGLAQQLQLL PHFRPGAMGT KPKMVGEEMG QFHQLQQQQQ QQQQAIIDQL FKAAELVQTG  420
NPVLAQGILA RLNHQLSPIG KPFYRAAFHC KEALQLLLHA NTNNLNASMA SSSPFTLIFK  480
IGAYKSFSEI SPVAQFANFT CNQALLEVLD GFERIHIVDF DIGYGGQWAS LMQELALRSG  540
GAPTLKITAL ASPSTHDQLE LGLTRENLIH FASEINMAFE FEILSIDSLN STSWSLPPLI  600
SENEAIAVNL PVSSLSSYQL SLPLVLRFVK QLSPRIVVSV DRGCDRTDLP FPNHVIQALQ  660
SYSNLLESLD AVNVNFDALQ KIERFLVQPG IERIVMGRFR SPEKTQHWRT LFLSSGFSPL  720
SLSNFTESQA ECVVKRTPVR GFHVEKRQSS LVLCWQRKEL ISASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-128GRAS family protein