PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT60733.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 737aa MW: 80736.1 Da PI: 7.1414

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT60733.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	2e-09	442	479	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + PHT60733.1 442 FEHflHPYPKDSDKMMLAKQTGLTRSQVSNWFINARVR 479 554459******************************88 PP
2	BELL	113.1	1.5e-36	306	377	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY++y++q+qtvi e++ag+gsak Yt+lAl++iS++FrcLkdai++qi PHT60733.1 306 ERQEIQMKKAKLVNMLDEVEQRYRHYHHQMQTVIHWLEQAAGIGSAKTYTALALQTISKQFRCLKDAIIGQI 377 79*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 737 aa Download sequence
MYGLKLSFMY IERADLCKAS NKEISFLFFI VRKKMASYFH GNSEIQTGND GLQTLILMNP 60 GYVGFSETQH HQQQQQQQGV SSNNLIFFNS NTVGSSINLS HAPPPPPPPP SQQFVGIPLA 120 TAAFAAPSSS SQEGGNSNND SISALHGFLA RSTQYGFYNP SNDITAARDI TRAHQQGLSL 180 SLSSQQPGFG NFNAAREIVS PTAGGGSASS GILQQPGSSS SSVPLSSKYL KAAQELLDEV 240 VNVGKSMKST STNSTEVVND DVKKLKNTTK TTITTTTDVD GQVDGGDSNS KHDGVAVAGT 300 ELSTAERQEI QMKKAKLVNM LDEVEQRYRH YHHQMQTVIH WLEQAAGIGS AKTYTALALQ 360 TISKQFRCLK DAIIGQIRSA SKTLGEEDSL GTKIEGSRLK FVDNQLRQQR ALQQLGMIQH 420 NAWRPQRGLP ERAVSVLRAW LFEHFLHPYP KDSDKMMLAK QTGLTRSQVS NWFINARVRL 480 WKPMVEEMYL EEVKEHEQNG TDQEKTNKLG EQNDDSTTSR SIAQQQKSPG SDVSKQHNST 540 STMPMSNATS ISPIGMSIRN QSAAGFNLIG SPEIESIDIT QGSSPKKLRS NNDMLHSPNM 600 DVKPDEDQMS MKFGDDRQDR DGFSLMGGPM NFMGGFGAYP IGEISRFSTE QFSAPYSASG 660 AVSLTLGLPH NENLPMSATH HSFLPIPTQN IQIGEANHEF GSLNTPTSAH STTSVYENFN 720 IQNRKRFAAP LLPDFVA

Sequence ? help Back to Top

Protein Sequence Length: 737 aa Download sequence

MYGLKLSFMY IERADLCKAS NKEISFLFFI VRKKMASYFH GNSEIQTGND GLQTLILMNP  60
GYVGFSETQH HQQQQQQQGV SSNNLIFFNS NTVGSSINLS HAPPPPPPPP SQQFVGIPLA  120
TAAFAAPSSS SQEGGNSNND SISALHGFLA RSTQYGFYNP SNDITAARDI TRAHQQGLSL  180
SLSSQQPGFG NFNAAREIVS PTAGGGSASS GILQQPGSSS SSVPLSSKYL KAAQELLDEV  240
VNVGKSMKST STNSTEVVND DVKKLKNTTK TTITTTTDVD GQVDGGDSNS KHDGVAVAGT  300
ELSTAERQEI QMKKAKLVNM LDEVEQRYRH YHHQMQTVIH WLEQAAGIGS AKTYTALALQ  360
TISKQFRCLK DAIIGQIRSA SKTLGEEDSL GTKIEGSRLK FVDNQLRQQR ALQQLGMIQH  420
NAWRPQRGLP ERAVSVLRAW LFEHFLHPYP KDSDKMMLAK QTGLTRSQVS NWFINARVRL  480
WKPMVEEMYL EEVKEHEQNG TDQEKTNKLG EQNDDSTTSR SIAQQQKSPG SDVSKQHNST  540
STMPMSNATS ISPIGMSIRN QSAAGFNLIG SPEIESIDIT QGSSPKKLRS NNDMLHSPNM  600
DVKPDEDQMS MKFGDDRQDR DGFSLMGGPM NFMGGFGAYP IGEISRFSTE QFSAPYSASG  660
AVSLTLGLPH NENLPMSATH HSFLPIPTQN IQIGEANHEF GSLNTPTSAH STTSVYENFN  720
IQNRKRFAAP LLPDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-117	TALE family protein