PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT60738.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 324aa MW: 36309.8 Da PI: 6.4084

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT60738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	117.8	4.1e-37	15	70	6	61
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC stntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvP+Ggg+rk+++ PHT60738.1 15 PACPRCGSTNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRRG 70 57**************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MERGTIWKPN VELAPACPRC GSTNTKFCYY NNYSLTQPRY FCKGCRRYWT KGGSLRNVPI 60 GGGCRKSRRG KSSSNTIHNH HHHELISRNL GHGVCLNPTN IDHHNQSTSS SLDHHHGPSI 120 DLALVYSNFL NSTNSKSSQL EDRQNLELPD DLLLPDEGVL VTPSFELSRM IDMEFVNSEL 180 GQESQLLGAG AGVDFYFSGI HEEKQNVMNH SDVHDDHYTN INVNANNSIN HDHQLGNNNY 240 MELPPLPSED IMWSNSHHHH HHHMVFPNDI LSTSHNLTTG VSSEAEPEPE PESAIQNPSH 300 DHSANNANDG SLFNLSNFGN IFKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	3e-34	Dof family protein