PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT96213.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 110aa    MW: 12311 Da    PI: 6.9049
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT96213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H221.18.3e-071435223
                EETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                +Cp C + F++k++L +Hir H
  PHT96213.1 14 SCPFCRRFFPSKDSLDTHIRAH 35
                6*******************99 PP
2zf-C2H213.10.000294468123
                EEETTTT.EEESSHHHHHHHHHH.T CS
     zf-C2H2  1 ykCpdCg.ksFsrksnLkrHirt.H 23
                y C+ Cg  + ++ ++L++H+ + H
  PHT96213.1 44 YGCKVCGlPVSKSAEELNQHMISeH 68
                67*******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MSFSEGKRPA QVTSCPFCRR FFPSKDSLDT HIRAHADVDT EGNYGCKVCG LPVSKSAEEL  60
NQHMISEHNF GEFSSSITVI VIMILFRRFS SDRSPYLDVF LPNGAMCIVT