PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT96234.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 159aa    MW: 17590.1 Da    PI: 9.6158
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT96234.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.63.5e-1175122455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  PHT96234.1  75 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 122
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MKQPIDIHTN SNSVQDGSVA KRLKASQSKE ENGASKVELE SSSQTANKDT EQSSKPEPPK  60
DYIHVRARRG QATDSHSLAE RARREKISER MKILQDLVPG CNKVIGKALV LDEIINYIQS  120
LQRQVEVVPH LPCIKVILFI NSSHNLIRAA LIGLSSSCP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.11e-48bHLH family protein