PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT96313.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 192aa    MW: 20774.3 Da    PI: 9.1942
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT96313.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.00075121142223
                 EETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                 +C+ C+ sF++k  Lk+H  +H
  PHT96313.1 121 SCNQCNASFKTKQILKNHKLVH 142
                 7*****************9988 PP
2zf-C2H222.62.8e-07148170123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C+ sF+rk nL++H ++H
  PHT96313.1 148 FSCTKCNASFKRKKNLVVHAMSH 170
                 89*****************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MMNRAALLSD RRLGKAHINS ASCECKYCSE DGGLALFDGD TPNNSRGNVP SKSGQALLRS  60
KENSGSSAQL TDATAPPPEN IGNSDEYSTT VSRGDPHNFD AAHSGSSLLQ RNVETRSGML  120
SCNQCNASFK TKQILKNHKL VHTDERPFSC TKCNASFKRK KNLVVHAMSH TGLKPFTCIA  180
ISAMHLSKQS VF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04240.18e-08C2H2 family protein