PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT96489.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 244aa    MW: 28219.3 Da    PI: 4.2856
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT96489.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM27.49.5e-09349248
         NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLp 48
                  G+rFhPtdeel+ +yLk+ v +  l+  ++i+ +d+ + +ePw++ 
  PHT96489.1  3 SLGYRFHPTDEELI-NYLKNFVLHGVLPPRDFINVADLSEdLEPWEIM 49
                57************.9**********999999****997626***985 PP
2NAM22.72.7e-075210379128
         NAM  79 ksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +g+Wk + + +++ +   k++++g k++L + + ++++ ++ +W+m+ey l
  PHT96489.1  52 GKGTWKGQNSGNPIEDGlkKNTTIGYKRSLKYKSDNEKDENNDKWLMKEYFL 103
                 68************987768888**********9999999**********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MLSLGYRFHP TDEELINYLK NFVLHGVLPP RDFINVADLS EDLEPWEIMT VGKGTWKGQN  60
SGNPIEDGLK KNTTIGYKRS LKYKSDNEKD ENNDKWLMKE YFLPDEYFRK SNKNYAFVIC  120
KIKEKKKNEK KNKGVVNDDV MEEEVDEFID YVLESIPDNH QVITNGDDNR FAVENEVNYE  180
VMRTNYEAST STLHEDYGGE GRSNYLEGGG VEDFNGINHL LLGVEDINDE NCCIDYDELL  240
EIIG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.12e-09NAC family protein