PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT96640.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 230aa    MW: 26489.3 Da    PI: 9.8977
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT96640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.35.3e-10163201850
         AP2   8 wdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaar 50 
                   +k+g+++ eIrd +     + kr++lg+f taeeA + +   +
  PHT96640.1 163 K-RKSGKFATEIRDpF-----SkKRIWLGTFNTAEEASEVYQSKK 201
                 4.458*********66.....44**************99886655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MKSPAKQDFI EENQEEDFIQ RKIRVKILDA DATESSSDDD EQQEKRPKYI VHEIIQEKVK  60
IQSFSINNGS PFDFYQFSGK LSPMVRKKKC GKLGTEEKLK VAIFAKSENG SSGDLPLMVD  120
SQTSDLLKNI TTEYEEKLNV AKNAKVKGLF LQNLKLGHLH QRKRKSGKFA TEIRDPFSKK  180
RIWLGTFNTA EEASEVYQSK KLEFQEKLNK AKNRLFLQNV NLGCHLVIHH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161166QRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.17e-16ERF family protein