PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT96881.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 258aa MW: 29617.8 Da PI: 8.8064

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT96881.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.2	1.4e-16	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd ll ++++++G g W++++++ g++R++k+c++rw++yl PHT96881.1 15 KGAWNEEEDFLLRKCIEKYGEGKWHLVPARAGLNRCRKSCRLRWLNYL 62 79********************************************97 PP
2	Myb_DNA-binding	33.7	8.7e-11	68	136	1	46
TSSS-HHHHHHHHHHHHHTTTT........................-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg........................tWktIartmgkgRtlkqcksrwqk 46 rg + ++E +l+++++k+lG++ W++Ia +++ gRt++ +k++w++ PHT96881.1 68 RGDFDPDEVDLILRLHKLLGNRqfyvldspkfagsshlkvndirdlEWSLIAGRLP-GRTANVVKNFWNT 136 78999*************************************************.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MNTPIICTTS LQVRKGAWNE EEDFLLRKCI EKYGEGKWHL VPARAGLNRC RKSCRLRWLN 60 YLRPHIKRGD FDPDEVDLIL RLHKLLGNRQ FYVLDSPKFA GSSHLKVNDI RDLEWSLIAG 120 RLPGRTANVV KNFWNTRLLR KVNIAPINNK IGDNINTKNE IIRPQPRNFS STMKNVSWCN 180 NKSIINEANI LENCYEIEEA IATGTRTPLC KNISSEKNCN EIDKTPCFLN GGGNAMQQGQ 240 SDGGWDEFSM DDIWNLLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	4e-54	MYB family protein