PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT97040.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 221aa    MW: 24854.4 Da    PI: 9.5192
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT97040.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer72.47.1e-23963358
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                  v+Y eC++N Aas  ++++DGCgEf+p+ g++gt++ + CaAC+CHR+FHR+ ++
   PHT97040.1  9 VVKYLECMHNYAASSMSYVFDGCGEFCPA-GAQGTPDFFICAACQCHRSFHRKMEV 63
                 589*************************9.999*******************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MASNNKHLVV KYLECMHNYA ASSMSYVFDG CGEFCPAGAQ GTPDFFICAA CQCHRSFHRK  60
MEVEVESEAE LPINGTPLAT IDGSPASPPQ QCLARSRQLH HSHQTFNRKK VVAMPPQGGA  120
KKDKGKGETE LANQSSFTRR KCNSTATTSS GRIRLNAYQK KRILTFVKEV MGWRWTKWNN  180
KVIPFCDEIG ITPQFLKNWI NYNRRIIGPL KEPSNENESV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.11e-22ZF-HD family protein