PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT97106.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 136aa    MW: 15209.3 Da    PI: 8.1475
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT97106.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer57.72.6e-181464354
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHR 54
                  ++Y  Clk hA + G  avDGC+Ef++s g++gt++a  Ca CgC R F R
   PHT97106.1 14 VIKYGVCLKSHATKFGHFAVDGCCEFVKS-GDDGTKEAYICANCGCIRGFNR 64
                 689*************************9.999*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MTSNSSSNSI DKMVIKYGVC LKSHATKFGH FAVDGCCEFV KSGDDGTKEA YICANCGCIR  60
GFNRINNPLL HRYQTIKFHF LHNDVIPQGE NVSISHPFMR EILSTRTSQV SFPTSLPGLI  120
RDPVHENAFR DLTTPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.19e-16ZF-HD family protein