PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT97175.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 244aa    MW: 27567.8 Da    PI: 5.4596
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT97175.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.11.2e-06183228354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++ n  Er+RR ++++    L+ ++P a      +++ +++L +Av+Y+ksL
  PHT97175.1 183 TTSNCSERKRR-KLKKMVKALKGIVPGA-----SRMNTVTVLDEAVRYLKSL 228
                 678999***98.7**************9.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MQSNYHFLTQ KPYVSLEDQA AGGNMFDIPP PSVYGTMALP TGLRSSVPFH GFEFQSSEAC  60
PKNFIIFDQT DYRSQIMYHP AMASKFPYPD LNYNSTCFQE GMEKKIANNE NTEVSSYLKE  120
DSDDINALLS LEEEEREEYD EEEVSTARTD ANYGSSSPES YSNYDCQSKK SRTSSFRKCS  180
GSTTSNCSER KRRKLKKMVK ALKGIVPGAS RMNTVTVLDE AVRYLKSLKV EVQKLGVENL  240
KTFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.13e-33bHLH family protein