PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT97364.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 391aa MW: 45523.5 Da PI: 4.9001

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT97364.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	76.8	5e-24	125	250	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 G+rFhPtdeel+ +yLk+ v + l+ ++ik +d+++ +ePw++ + +eek yf s+ ++ +++ k+ +r++ +g+Wk + + +++ + k++ PHT97364.1 125 LGYRFHPTDEELI-NYLKNFVLHGVLPPRDFIKVADLFEdLEPWEIM--AGSEEKTRYFLSRLKRFKNSTKKFSRTVGKGTWKGQNSGNPIEDGlkKNT 220 69*********.9******999999998626*6..55677899******99******************98776888 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++g k++L + + ++++ ++ +W+m+ey l PHT97364.1 221 TIGYKRSLKYKSDNEKDENNDKWLMKEYFL 250 8******9999999********76 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MKSNTVVITN KLENIFPPVF FDVMEHLPIH LVREARIGGS VQTRWMYPFE RDKSDWWAII 60 KIKPIGRVEV ENVLETAYQN KMQIDHQLVD VDCLGRMLEL DKLRENAFVR TSTATGPVDK 120 RMVSLGYRFH PTDEELINYL KNFVLHGVLP PRDFIKVADL FEDLEPWEIM AGSEEKTRYF 180 LSRLKRFKNS TKKFSRTVGK GTWKGQNSGN PIEDGLKKNT TIGYKRSLKY KSDNEKDENN 240 DKWLMKEYFL PDEYFMKSNK NYAFIICKIK EKKKNEKKNK GVVNDDVMEE EVDEFIDYVL 300 ESIPDNHQVI TNGDDNRFAV ANEVNYEVMR TNYEASTSTL HEDYGGEGRS NYLEGDGVED 360 FNGINHLLLG VEDINDENCC IDYDELLEII G

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MKSNTVVITN KLENIFPPVF FDVMEHLPIH LVREARIGGS VQTRWMYPFE RDKSDWWAII  60
KIKPIGRVEV ENVLETAYQN KMQIDHQLVD VDCLGRMLEL DKLRENAFVR TSTATGPVDK  120
RMVSLGYRFH PTDEELINYL KNFVLHGVLP PRDFIKVADL FEDLEPWEIM AGSEEKTRYF  180
LSRLKRFKNS TKKFSRTVGK GTWKGQNSGN PIEDGLKKNT TIGYKRSLKY KSDNEKDENN  240
DKWLMKEYFL PDEYFMKSNK NYAFIICKIK EKKKNEKKNK GVVNDDVMEE EVDEFIDYVL  300
ESIPDNHQVI TNGDDNRFAV ANEVNYEVMR TNYEASTSTL HEDYGGEGRS NYLEGDGVED  360
FNGINHLLLG VEDINDENCC IDYDELLEII G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	4e-17	NAC family protein