PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT97391.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 404aa MW: 44540.9 Da PI: 8.9814

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT97391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.8	1.9e-05	71	93	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H PHT97391.1 71 FICEVCNKGFQREQNLQLHRRGH 93 89*******************88 PP
2	zf-C2H2	15.2	6e-05	148	170	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ PHT97391.1 148 WKCDKCSKKYAVQSDWKAHLKTC 170 58*******************98 PP
3	zf-C2H2	10.6	0.0018	178	196	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg+ Fsr++++++H + PHT97391.1 178 DCGTIFSRRDSFVTHRAFC 196 8**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MSNLSYGNSS TEEADETPNV LSSTTSDGSS VHQEQPLPSP NKRRRKLPGN PDPSAEVIAL 60 SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKTSNHEIKK RVYICPESSC 120 VHHDPARALG DLTGIKKHFS RKHGEKKWKC DKCSKKYAVQ SDWKAHLKTC GTKEYKCDCG 180 TIFSRRDSFV THRAFCDALA EENNKVNQVL ASTTQPAATS TGSTQLGPEL ISNTSMLNLL 240 QISNPNIKVP PTSLSNMAGS MFSSSSGYGQ LGTNSSNMSS ATALLQQAAQ MGATVSSNMN 300 SSINVARKSY RSPFNGMQIP IISDHDQIQP QIGNTSVHGF AGSMLQNSSS NNDSLTLDFL 360 GIGGMRQRNL HEIIQQQQQQ EMSFEQQKEV GQQSIQGMNS MWDD

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MSNLSYGNSS TEEADETPNV LSSTTSDGSS VHQEQPLPSP NKRRRKLPGN PDPSAEVIAL  60
SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKTSNHEIKK RVYICPESSC  120
VHHDPARALG DLTGIKKHFS RKHGEKKWKC DKCSKKYAVQ SDWKAHLKTC GTKEYKCDCG  180
TIFSRRDSFV THRAFCDALA EENNKVNQVL ASTTQPAATS TGSTQLGPEL ISNTSMLNLL  240
QISNPNIKVP PTSLSNMAGS MFSSSSGYGQ LGTNSSNMSS ATALLQQAAQ MGATVSSNMN  300
SSINVARKSY RSPFNGMQIP IISDHDQIQP QIGNTSVHGF AGSMLQNSSS NNDSLTLDFL  360
GIGGMRQRNL HEIIQQQQQQ EMSFEQQKEV GQQSIQGMNS MWDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	3e-99	C2H2 family protein