PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT97457.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 220aa    MW: 25439.6 Da    PI: 9.0323
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT97457.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer68.11.5e-21963357
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                  v+Y eC++N Aa+  +h++DGCgEf+p+  ++ t++++  aAC CHRnFHR+ +
   PHT97457.1  9 VVKYLECRHNYAARFNSHVLDGCGEFCPTGAHDDTPESFISAACHCHRNFHRKVE 63
                 589**************************7788*******************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MTSNNKHFVV KYLECRHNYA ARFNSHVLDG CGEFCPTGAH DDTPESFISA ACHCHRNFHR  60
KVEVVVEARV ELPIFSINHP INDAPLAIID GPPISPQRQY STRPEQPHHR HQRFYKNNIV  120
IIQPQGAEIE MGGGEVEVAD QSNFKRNYNN ASSSVRMKLK PNQKERVLAF AKDVMRWRWT  180
KDNDQVLSFC DEIGITPRFL RTWINNNVRR IGPXYTIKII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.11e-22ZF-HD family protein