PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT97540.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 240aa    MW: 26598.4 Da    PI: 7.2923
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT97540.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.18.9e-1077124454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++  rEr RR+++N++f eL  ll +    + +K + ++iL  Av+ + +L
  PHT97540.1  77 SKACRERLRREKLNDKFMELAALLEPG---SPPKTDNSAILVDAVRVVTQL 124
                 6789**********************7...789*************99888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MITPENIDWL YDYNFYAISI PANFSFSASG FSWSMQGFNG STNASVDIDG SIGESDCLKE  60
SGSKKRARVE SCTSSSSKAC RERLRREKLN DKFMELAALL EPGSPPKTDN SAILVDAVRV  120
VTQLRGEAQK LKDSNLDLQE KIKELKASIC YFLSVEKHEL RDEKQRLKSE KEKLEQQLKT  180
MSAQPGFLPP AMLGTFAAPV QAAVSKLVPI VSYPGMAMWQ FMPPAAIDTS QDHVLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-87bHLH family protein