PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT97566.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 244aa    MW: 28241.8 Da    PI: 9.726
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT97566.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.87.3e-22491773128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk..kvka...eekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                  G+rFhP+deel+ +yL k v+ k+ ++ + i+  d+y   +Pwd+ +  ++ +   + k++ yfF+k +kk++ g+r  r ++  g Wk    +k+v+
  PHT97566.1  49 LGIRFHPRDEELI-RYLLKFVSCKNYSC-DNIRLDDLYGNkKPWDIFEsnST-GgdgDAKNVkYFFTKLKKKKSDGRRFIRtVIGGGSWKGLDGEKPVY 144
                 69***********.9**********999.7899999996549****632322.2333333335******************8889************** PP

         NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 + + +lvg kk   +   +  ++    W+m ey+l
  PHT97566.1 145 D-GLKLVGSKKNYRYQ-YKGYQADDVVWTMREYSL 177
                 *.99*********996.45556679********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MTVIVWPRSR TVTIVAIPED GFMPALHIYI YYVGLIQLNF FKYPVMGLLG IRFHPRDEEL  60
IRYLLKFVSC KNYSCDNIRL DDLYGNKKPW DIFESNSTGG DGDAKNVKYF FTKLKKKKSD  120
GRRFIRTVIG GGSWKGLDGE KPVYDGLKLV GSKKNYRYQY KGYQADDVVW TMREYSLDEK  180
ILKALRRRGL IQYEDVVLCC VKRKINVHAR DHKELGDCMP MEITSGDEVV AARNSLLHGS  240
WTSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.16e-11NAC family protein