PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT97604.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 405aa MW: 47368.4 Da PI: 6.9793

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT97604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.1	0.00075	346	366	10	30
HHHHHHHHHHHHHHHCTSCCC CS HLH 10 rrRRdriNsafeeLrellPka 30 rrRR + s +++L ++lP+ PHT97604.1 346 RRRRFGMSSEIQKLAKILPTY 366 9******************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MVYSFVATGA EDNEHGEEES FKRDDPNTSS PSVEELVKTF SIDRYPMRMQ CDGATNLTGD 60 LVVKESCFGK YLDLPKDNNA RFQMKMVYDL FKRRFMYENK DKMDERWINY RGMPICFAPR 120 TPKKGKDKSS DRDDLVSIDG PSFKNKNLIE ALKGKGLSKK HKQLLCFVWF VHNVLWARDV 180 NNNISIGLIN LFEDLEAFNS YPWGYECFKM TVEYLLTPLT SKTVNLYGFP WAFMAWTFEA 240 IPYLRQQVNY QEEVSCPRIL RWLSAKIDKN TKFLDLFDFP KEAPKVFQNE ECLINIIKGF 300 SISAGLPWHL VDEVYIPINC GDEFHWVLAI VVLKERRIRD YDSMSRRRRF GMSSEIQKLA 360 KILPTYLDMS GFLDQKVCTD WLTIEAYRDK MANPFNVQYV DGIAQ

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MVYSFVATGA EDNEHGEEES FKRDDPNTSS PSVEELVKTF SIDRYPMRMQ CDGATNLTGD  60
LVVKESCFGK YLDLPKDNNA RFQMKMVYDL FKRRFMYENK DKMDERWINY RGMPICFAPR  120
TPKKGKDKSS DRDDLVSIDG PSFKNKNLIE ALKGKGLSKK HKQLLCFVWF VHNVLWARDV  180
NNNISIGLIN LFEDLEAFNS YPWGYECFKM TVEYLLTPLT SKTVNLYGFP WAFMAWTFEA  240
IPYLRQQVNY QEEVSCPRIL RWLSAKIDKN TKFLDLFDFP KEAPKVFQNE ECLINIIKGF  300
SISAGLPWHL VDEVYIPINC GDEFHWVLAI VVLKERRIRD YDSMSRRRRF GMSSEIQKLA  360
KILPTYLDMS GFLDQKVCTD WLTIEAYRDK MANPFNVQYV DGIAQ