PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT97645.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 417aa MW: 47577.4 Da PI: 6.3942

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT97645.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	67.8	3e-21	4	132	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.k.kvka..eekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 G+rFhP+deel+ +yL k v+ k+ ++ + i+ d+y +Pw++ + ++k+ + k++ yfF+k +kk+a g+r r ++ g W+ +k+v++ PHT97645.1 4 LGIRFHPRDEELI-RYLLKFVSCKNYSC-HNIQFEDLYGNkKPWEIFeSnSTKGdeDAKKVkYFFTKLKKKKADGSRYIRtVIGGGSWNGLDGEKPVYD 100 59*********.9*******999.779999996549**6333333322233336**************8889*********** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +lvg kk + + ++ W+m ey+l PHT97645.1 101 -GLKLVGSKKNYRYQ-YKGYQADDVVWTMREYSL 132 .99*****996.45556679******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MGLLGIRFHP RDEELIRYLL KFVSCKNYSC HNIQFEDLYG NKKPWEIFES NSTKGDEDAK 60 KVKYFFTKLK KKKADGSRYI RTVIGGGSWN GLDGEKPVYD GLKLVGSKKN YRYQYKGYQA 120 DDVVWTMREY SLDEKILKAL RRRGLIQYED VVLCCVKRKI NVHARDHKEL GDCMPMEITS 180 GDEVVAAAMD ATLQTTQQHK HNNVFQELQQ DQNSEQLINQ VQNIEDMAPF ARNHNGYVAS 240 YIEQGTANFH DSCPIYPSTL FEHNNAFQEL QQDQNSEQVN VVQGNNIEER ADFSSTLADL 300 LNDIGTQPQL LIGINVHARD HKELGDYTLM EIPSGDEVVA AMDARLLTTQ QHDSCLLNPF 360 TSSEHNNVFH ELQQDQSSSG GNKRCSFTSP LYVYNGSLAK TLLRCPREPR TKTASLL

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MGLLGIRFHP RDEELIRYLL KFVSCKNYSC HNIQFEDLYG NKKPWEIFES NSTKGDEDAK  60
KVKYFFTKLK KKKADGSRYI RTVIGGGSWN GLDGEKPVYD GLKLVGSKKN YRYQYKGYQA  120
DDVVWTMREY SLDEKILKAL RRRGLIQYED VVLCCVKRKI NVHARDHKEL GDCMPMEITS  180
GDEVVAAAMD ATLQTTQQHK HNNVFQELQQ DQNSEQLINQ VQNIEDMAPF ARNHNGYVAS  240
YIEQGTANFH DSCPIYPSTL FEHNNAFQEL QQDQNSEQVN VVQGNNIEER ADFSSTLADL  300
LNDIGTQPQL LIGINVHARD HKELGDYTLM EIPSGDEVVA AMDARLLTTQ QHDSCLLNPF  360
TSSEHNNVFH ELQQDQSSSG GNKRCSFTSP LYVYNGSLAK TLLRCPREPR TKTASLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	7e-11	NAC family protein