PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT97737.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GATA

Protein Properties

Length: 214aa MW: 23665.5 Da PI: 5.1472

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT97737.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	39.4	8.3e-13	37	65	7	35
GATA 7 tkTplWRrgpdgnktLCnaCGlyyrkkgl 35 ++T +WR+gp +++LCnaCGl++r + + PHT97737.1 37 IETFNWRNGPHEKPMLCNACGLRWRTRQT 65 57***********************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MIRGHCGRGN LRKGLVVFDE MEKSGCLRNV VTYNTIIETF NWRNGPHEKP MLCNACGLRW 60 RTRQTLDGCV PKHANGEIQS SQLPSEMKPA RDDQKLEVGV EVSGQHGSSA CLEEEMNNIS 120 AIGSAGSASD NCIQMEETNE IGVFGRDKMG DHNMRLHEMR KEIDALKGSM EGVASSVSKM 180 GDIVDTKVTN ANDRDQAIDC YNDNGSWAIT EWTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.2	2e-11	GATA family protein