PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT97907.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HSF
Protein Properties Length: 314aa    MW: 34938.3 Da    PI: 7.0327
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT97907.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind108.26.3e-342915103
                   HHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXX CS
  HSF_DNA-bind   5 klyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkk 101
                   k+y++++d++++ li+w + +nsf+v+++ ef++++Lp yFkh+nf+SFvRQLn+YgF+kv+ ++         weF++++F +g+ +ll++i rkk
    PHT97907.1   2 KTYQMVNDPKIDGLITWGAANNSFIVVQPLEFSQNILPVYFKHNNFSSFVRQLNTYGFRKVDPDK---------WEFANEWFLRGQIHLLKNIVRKK 89 
                   9*****************999*****************************************999.........**********************9 PP

                   XX CS
  HSF_DNA-bind 102 se 103
                   ++
    PHT97907.1  90 HS 91 
                   76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MKTYQMVNDP KIDGLITWGA ANNSFIVVQP LEFSQNILPV YFKHNNFSSF VRQLNTYGFR  60
KVDPDKWEFA NEWFLRGQIH LLKNIVRKKH SRNSYSVCQK HDNDSEDEEI LNEISRLKQE  120
QKVLDDEIGN MTRRLEATEK RPQQMMAFLC KVVDDPEILP KILMEKDKSK RLMISNRDKK  180
RRLMLSNSAS SQSLKSEEEK VGVKSSFYSP GSNYEKDAFC QSSPSSESTP PVTGAAVHGG  240
RPVMMVANEV YGNCPTMSSS LSSGSSESGG FTATAMDNFY GYDYGGGGGS GSGGPVAEEA  300
SPPPYPFSLL GGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.14e-83HSF family protein