PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT98072.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 170aa MW: 19043 Da PI: 9.916

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT98072.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00023	50	72	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k+Fs+ L H +H PHT98072.1 50 FKCKTCNKRFSSFQALGGHRASH 72 89**********99999998887 PP
2	zf-C2H2	11.8	0.00073	92	112	1	21
EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21 +kC++Cg+ Fs+ L H+r PHT98072.1 92 HKCSICGMEFSSGQALGGHMR 112 79*************999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MNKNILNNMS VMKRKREDYG LVEAEAMANC ALMLSSRSSA SFDGDNLNSF KCKTCNKRFS 60 SFQALGGHRA SHNKRPKLLG DFLIQAKKNM LHKCSICGME FSSGQALGGH MRCHREEINK 120 TVIPVLKKSN SSKRIFGLDL NLTPHDDDDD VDLKLWPTAP ISSPVLRIFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	2e-29	C2H2 family protein