PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT98081.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 256aa MW: 29461.9 Da PI: 7.8756

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT98081.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.5	3.4e-09	61	105	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT Ed+++ +a ++ + +W +Ia++++ gRt +++ ++ PHT98081.1 61 TWTRFEDKQFEQALVLYSENdveRWQKIANHVP-GRTVEDVMMHYD 105 7******************************.*****99985 PP
2	Myb_DNA-binding	43.9	5.3e-14	165	209	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky PHT98081.1 165 PWTEEEHRLFLIGLDKYGKGDWRSISRNVVVTRTPTQVASHAQKY 209 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MWIESYYQNT SLNSSAKTLS LFYIQTKKKI TKSTMMYTTN NRWMIGDAAN NSTAMIQSNS 60 TWTRFEDKQF EQALVLYSEN DVERWQKIAN HVPGRTVEDV MMHYDTLVHD VFEIDSGRVE 120 PPSYPDDDGG FGGDWDELDG GKLSQISFGG GASKKQEVER KKGTPWTEEE HRLFLIGLDK 180 YGKGDWRSIS RNVVVTRTPT QVASHAQKYY LRQQSMKKER KRSSIHDITT AVDTKMVPPQ 240 NSLQNQGAYQ NFNFPM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	5e-71	MYB family protein