PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT98131.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Nin-like
Protein Properties Length: 204aa    MW: 23366.3 Da    PI: 7.4235
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT98131.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK69.74e-22113162352
      RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                  +++l+d + y +lpi+ AAk+L++c+Tv+K+ CR+ G++RWP+Rki+s+
  PHT98131.1 113 GKLRLKDFAGYLHLPIEIAAKKLNICPTVMKKVCRRDGLSRWPYRKINSI 162
                 68999*******************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MDFSSQTHKS SQIFDFSNDS TNSVKQFLVH YFEACKSEGY IVLQDPLCNF YEALGVGSDG  60
GDCFDIDSLL QLSPTTSRDF KMDQQEKRNE SEDNNSDVRH EKISLSAQRE RTGKLRLKDF  120
AGYLHLPIEI AAKKLNICPT VMKKVCRRDG LSRWPYRKIN SIQRKISLRE KCLSSNHVEE  180
RVSAKAAIAK LEQELDNIFE AFSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.11e-11Nin-like family protein