PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT98148.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 482aa MW: 53516.1 Da PI: 5.4646

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT98148.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.2	7.5e-35	23	113	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+ye+++d ++++++sw+ +g+sfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F k++k+ll++i+ PHT98148.1 23 FLLKTYEMVDDTQTDDIVSWTPTGHSFVVWNPPEFARILLPTYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANEDFLKDQKHLLKNIH 110 9**************************************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k PHT98148.1 111 RRK 113 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MDVISPAAAA GGGGGGGGGP APFLLKTYEM VDDTQTDDIV SWTPTGHSFV VWNPPEFARI 60 LLPTYFKHNN FSSFIRQLNT YGFRKIDPER WEFANEDFLK DQKHLLKNIH RRKPIHSHSH 120 PPGSAVDPER AAFEEEIDKL SREKSGLEAN VVTFRQQQSA AKLQLEELTG RVGSIEQRQE 180 SLLTFVEKAI QNPDFVERLA QKLESMDISA FSKKRRLPQI DSTQPVQESM SVDNHSSSRV 240 EFGNLCHQDF SNKLTLELSP AVSDINVLSC STQSSNEDGG SPHRRISEGW SREVQLRTGG 300 VLYTPEAIEL SDTGTSFTLK IDSSLPRTSS NVEHSRLHSL PQSLTSNEEV DGHISCQLNL 360 SLASCLSQVD KNQYSERMPQ IGQEMGKHSE SQSDANDKTP PTNDKPLPPS HDATGNKQGP 420 AAAAPVRVND VFWEQFLTER PGCSDNEEAS SSYRGNSYDE QDERKSNQGV ASNTRKVQHL 480 TL

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MDVISPAAAA GGGGGGGGGP APFLLKTYEM VDDTQTDDIV SWTPTGHSFV VWNPPEFARI  60
LLPTYFKHNN FSSFIRQLNT YGFRKIDPER WEFANEDFLK DQKHLLKNIH RRKPIHSHSH  120
PPGSAVDPER AAFEEEIDKL SREKSGLEAN VVTFRQQQSA AKLQLEELTG RVGSIEQRQE  180
SLLTFVEKAI QNPDFVERLA QKLESMDISA FSKKRRLPQI DSTQPVQESM SVDNHSSSRV  240
EFGNLCHQDF SNKLTLELSP AVSDINVLSC STQSSNEDGG SPHRRISEGW SREVQLRTGG  300
VLYTPEAIEL SDTGTSFTLK IDSSLPRTSS NVEHSRLHSL PQSLTSNEEV DGHISCQLNL  360
SLASCLSQVD KNQYSERMPQ IGQEMGKHSE SQSDANDKTP PTNDKPLPPS HDATGNKQGP  420
AAAAPVRVND VFWEQFLTER PGCSDNEEAS SSYRGNSYDE QDERKSNQGV ASNTRKVQHL  480
TL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-166	HSF family protein