PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT98155.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 313aa MW: 36758.7 Da PI: 6.2408

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT98155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	94.6	6.6e-30	91	174	1	85
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k+ltpsdv+k++rlv+pkk+a ++ + ++ +++++d+s +sW+++++y+k+s+++v+tkGW++Fvk++gL+++D++vF l PHT98155.1 91 FQKELTPSDVGKLNRLVIPKKYAMKYfpQ---IQDEEMIFYDTSRKSWKFRYCYWKSSQSFVFTKGWNKFVKDKGLRAKDTLVFNLC 174 99**********************633...35668*********************************************974 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MAYDSAAIRV LGHEHEHAHR NLAWTNSTIQ EPDFQTQFST EDILRMIKQG SYTSMFDEYL 60 KEKFVHHFQS LKTLPTMAEG NGAEFSYKQL FQKELTPSDV GKLNRLVIPK KYAMKYFPQI 120 QDEEMIFYDT SRKSWKFRYC YWKSSQSFVF TKGWNKFVKD KGLRAKDTLV FNLCEFKNVT 180 KENCNAFVID VVKCIEVLPM DLTLNHQQEQ GQVEESIGDN EVKKKEFMRA QTFDDHDVND 240 ALEPIWLFGK QIVRYIQVHG MAPPDHLSEE TVMVMDVMQQ VRQPPEQEHE KESNREPSID 300 ISESKYLGSL HSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51120.1	8e-60	RAV family protein