PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT98404.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 124aa    MW: 14279.8 Da    PI: 10.1722
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT98404.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.92.4e-1519100388
                 EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
          B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                 + +++++ ++++ l lp +fa+++g+ + ++ +++l+ e  r W+v l   ++++++ +  GW +F  +ngL++gD+  F+l+++ 
  PHT98404.1  19 S-TLKPYCFTKAFLFLPMRFAKSNGLMN-RNCEMILKGEVQRCWSVWL--GRTGNHFGIIHGWTKFRAENGLQVGDVYKFELIKNG 100
                 4.448999****************8775.5569***************..*******************************99863 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MKKPSNISLL DVGHSCFVST LKPYCFTKAF LFLPMRFAKS NGLMNRNCEM ILKGEVQRCW  60
SVWLGRTGNH FGIIHGWTKF RAENGLQVGD VYKFELIKNG EIPIAHFHCK YSVKVAKTEE  120
HRSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.14e-15B3 family protein