PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT98405.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 129aa    MW: 14914.1 Da    PI: 8.0873
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT98405.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.61.5e-151295399
                EE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  3 kvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                k       +k+g l +p  f+ ++ +g+   +++ ++  + g+ W vk++ +       +++GW  Fv++++L+ gD++vF+++g++ef   v++f++
  PHT98405.1 12 KPI--QPGFKNG-LKIPIGFL-KYlKGQ--DQIEHVVLRSGGKNWLVKVKCW------RFGAGWAAFVEQHDLQLGDILVFRHEGNMEF--EVSIFDS 95
                444..4556665.********.554666..5678888899*********322......389***********************99999..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MKIPPKKPHF FKPIQPGFKN GLKIPIGFLK YLKGQDQIEH VVLRSGGKNW LVKVKCWRFG  60
AGWAAFVEQH DLQLGDILVF RHEGNMEFEV SIFDSTHCDR EYAEYLQEED ACNNVEETSK  120
KLKFNGNTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.19e-20B3 family protein