PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT98463.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 464aa MW: 51543.9 Da PI: 10.0739

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT98463.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.7	9.1e-32	194	250	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkvers d++++ei+Y+geHnh+k PHT98463.1 194 DGYNWRKYGQKKVKGSEYPRSYYKCTHLKCPVKKKVERSY-DGQITEIVYRGEHNHPK 250 9*************************************.*************85 PP
2	WRKY	96.5	1.8e-30	383	439	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 +Dg++WrKYG K+vkgs +prsYYrCts++C+++k ver+++dp+++++tYeg+Hnh PHT98463.1 383 EDGFRWRKYGHKVVKGSSYPRSYYRCTSPKCSARKFVERTTDDPRAFITTYEGKHNH 439 7******************************************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MEVNEAVKIP IARPVASRPR CPVYKSFSEL LTGTVDISST NVHSEMAVTA IRPKTIRLKP 60 ATNHALVGEP SSQVGVSKAP VGFGSDNILQ SVEKPKVLYK PIAKLAPRKT IPLLENKGSS 120 VSDQQRVIAD SEAHVQSANE VKQQHDPTTE SKQSLSEKSG QDKTKVRSTI VSGSTEEVAQ 180 SLINTSNVDR PSYDGYNWRK YGQKKVKGSE YPRSYYKCTH LKCPVKKKVE RSYDGQITEI 240 VYRGEHNHPK PQPPKRNLSD GHRQTAICND TSKETNNPAW SNQHPQMSEV YVCRIENKND 300 LGLTIHSSKV PCFYDPIVAA GMHTAVRNSE DSAEGSKKLK ATCDEQKSKR RKIKGPSSGA 360 GTSGESTFPY IPNQSTTDSE ITEDGFRWRK YGHKVVKGSS YPRSYYRCTS PKCSARKFVE 420 RTTDDPRAFI TTYEGKHNHG VPNRRPNSEA SKTSSKSSAM KEKL

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MEVNEAVKIP IARPVASRPR CPVYKSFSEL LTGTVDISST NVHSEMAVTA IRPKTIRLKP  60
ATNHALVGEP SSQVGVSKAP VGFGSDNILQ SVEKPKVLYK PIAKLAPRKT IPLLENKGSS  120
VSDQQRVIAD SEAHVQSANE VKQQHDPTTE SKQSLSEKSG QDKTKVRSTI VSGSTEEVAQ  180
SLINTSNVDR PSYDGYNWRK YGQKKVKGSE YPRSYYKCTH LKCPVKKKVE RSYDGQITEI  240
VYRGEHNHPK PQPPKRNLSD GHRQTAICND TSKETNNPAW SNQHPQMSEV YVCRIENKND  300
LGLTIHSSKV PCFYDPIVAA GMHTAVRNSE DSAEGSKKLK ATCDEQKSKR RKIKGPSSGA  360
GTSGESTFPY IPNQSTTDSE ITEDGFRWRK YGHKVVKGSS YPRSYYRCTS PKCSARKFVE  420
RTTDDPRAFI TTYEGKHNHG VPNRRPNSEA SKTSSKSSAM KEKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	2e-87	WRKY family protein