PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT98489.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 180aa    MW: 20173 Da    PI: 9.7204
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT98489.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.4e-1175122455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  PHT98489.1  75 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 122
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MKQPIDIHTN SNSVQDGSVA KRLKASQSKE ENGASKVELE SSSQTANKDT EQSSKPEPPK  60
DYIHVRARRG QATDSHSLAE RARREKISER MKILQDLVPG CNKVIGKALV LDEIINYIQS  120
LQRQVEFLSM KLEAVNSRMN HPIETFPSKD LSLDNVNWKP PALVSGAFYV QIAFSMKLVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.12e-60bHLH family protein