PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT98698.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 317aa MW: 35772.9 Da PI: 5.0368

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT98698.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.6	1.2e-09	251	284	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +L++ +gL+++q+ +WF N+R ++ PHT98698.1 251 WPYPTEEEKNRLSEMTGLDQKQINNWFINQRKRH 284 58*****************************885 PP
2	ELK	38.8	2e-13	204	225	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++L+rKYsgyL+sL++EF+ PHT98698.1 204 ELKEMLMRKYSGYLSSLRKEFL 225 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MMDELSKLHS AIAACSRTST GQQQEGPPID HNTNSLVVHH HHHNNNNIGS SLEGMSDLIK 60 AQIANHPLYP NLLYAYLQCR KVGAPQELAS IFEEISKENN LISSCHTTEI GTDPELDHFM 120 ESYCAVLVKY KEELSKPFDE ATTFLNNIES QLSSLCKDSL ITSTSFNNDL SDEAGGTSDD 180 DLGCEEMEAA DGQESPASRE GDNELKEMLM RKYSGYLSSL RKEFLKKRKK GKLPKDARIA 240 LMDWWNTHNR WPYPTEEEKN RLSEMTGLDQ KQINNWFINQ RKRHWRPSED MKFALMEGVS 300 AGSMYFDGPG GTGSIDT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	229	LRKEFLKKRK
2	226	230	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G70510.1	1e-80	TALE family protein