PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT98820.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 102aa    MW: 11400.6 Da    PI: 7.7691
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT98820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.51.9e-10652347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                      W+ +  +l+ +a + + ++   +W++ a+ +g g+t++++ks++ k+
       PHT98820.1  6 TWSNQQNKLFENALAIYDTDtpdRWRKLAKAVG-GKTEEEVKSHYEKL 52
                     7********************************.***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MATNSTWSNQ QNKLFENALA IYDTDTPDRW RKLAKAVGGK TEEEVKSHYE KLVEDIKHIE  60
SGNVPLPNYN NGGGGGGGGR SNNGNNIIMD HEQQRLKYLK LQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.16e-29MYB_related family protein