PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT98829.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 92aa    MW: 10617 Da    PI: 9.7687
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT98829.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding316e-10347345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT+   +++++a +++  +   +W+ Iar++g g+++ +++ ++ 
       PHT98829.1  3 SWTARQNKKFKEALALYDRDtpdRWHNIARCVG-GKSAAEVRRHYE 47
                     6*****************99*************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MASWTARQNK KFKEALALYD RDTPDRWHNI ARCVGGKSAA EVRRHYELLV TDIMQIENGQ  60
VPLPNYKAAE NNNRGYANEL RYPKSLLSIQ PN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.16e-35MYB_related family protein