PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99020.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YA
Protein Properties Length: 315aa    MW: 34621.2 Da    PI: 9.7272
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99020.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA87.52e-27146200258
   CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  p++VNaKQy++Il+RR++Rak  e kk   k rkpylh SRh hAlrRpRg+gGrF
  PHT99020.1 146 GPIFVNAKQYHGILRRRKSRAKEME-KKA-LKPRKPYLHLSRHLHALRRPRGCGGRF 200
                 69*******************9666.555.6*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MTMHTTIFSK GNEGVVQNPV ATLCTAPWWS GGFVSQSMAY AEPFGQVKSA SVEQPPPPKG  60
NATEFTISSG DCKSSANGQK LSNIQTATSV RAANMDYRGH FELGFGQSLI SAKYPYGEQC  120
VGLFSAYSPQ LSGRIMLPLN LASDEGPIFV NAKQYHGILR RRKSRAKEME KKALKPRKPY  180
LHLSRHLHAL RRPRGCGGRF LNTRNMNGTM KDGKTNDTFR ASDVHNFYPT GSQNSEVLQS  240
DSSNLSSPKE TIDSRFYESS GVTNIYSSGN LDPFPFQNLR PLQVQAIPDM MNTGLGILMT  300
DKWVGTADSC CNLKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.23e-30NF-YA family protein