PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT99054.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Nin-like

Protein Properties

Length: 848aa MW: 95238.3 Da PI: 6.6247

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT99054.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	41.3	3e-13	531	572	4	45
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 isledl++++ ++ ++AA +v++++ Kr+CR+ GI RWP PHT99054.1 531 LISLEDLKQNYGKKRAEAAERFQVSVSTFKRRCREVGILRWP 572 599*************************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 848 aa Download sequence
MFDQYNNLDF GIEEDASNLP LIFCPSPGTL SWQDQCLSDH DGILSTVSKN VANYSTAVHG 60 ENVETMRDDS NNNNNNEPDP AHIVSKKLFC FADGHILDPH HVDLFCLDLL KRTYQLTIHR 120 HNESDSFSLT KVRVVSSDLV QLLEVFLLSK VRLMFLIDEE YWLLTDELNL KGTGQSHLQM 180 EVRLAFSLQN VMKSTMRYAI SHAASSRKTN SQNVKSFVVC EFENELFLDQ NADCRGKSKS 240 FIPCRSNIKL SPCRVASVVY SLYLYGEVHE DFTILGCVFD IGSSLCSSST SVKFSYRTEH 300 HSSPGHSQDY DSHGTLSLSP LLPSEESPVG CFKIAYCPQR ARLTSKSHRS PGSNKVSLNP 360 AAFLSFSYQK LKYSSGFVSS KNVFISLEVP PLRSSISRIV CYINFASSRI AKSIPILDSR 420 FTLQLGLGVK RVGVRQKQHG LSPYPDSAVF QSSSNGEMLL EAFNDNANAS NEIQEVIVDS 480 QTNIQNKRKK PSATRSLEDA SNEIQELIVD SQTNIQNKRK KPSTTQCAAS LISLEDLKQN 540 YGKKRAEAAE RFQVSVSTFK RRCREVGILR WPPVSGQKRK MKEKEADNID ESNNFEEKTS 600 TILNCTPKRQ AVDCGTKVSS CYNSTSGTTE GIYGYAVDDM DSTPMGVQLF LDSTSVQPLN 660 STSCDENSGQ KTKLLFDNLI ALPLKDLIDP ENETSMEKAL SILADNLSLF SEEQAEQILE 720 LSVDFHALVH SWRQYSQSQG RSQKSLAETE KIRDLAETSV KDEESLNVRY EELERKEQKL 780 MAQLEAVQKE KAGIAEQRNE KSKQTKHLVS LAEEKTTSTT KEKHMMKIAT TKLNTLVDQW 840 TKIQSFFI

Sequence ? help Back to Top

Protein Sequence Length: 848 aa Download sequence

MFDQYNNLDF GIEEDASNLP LIFCPSPGTL SWQDQCLSDH DGILSTVSKN VANYSTAVHG  60
ENVETMRDDS NNNNNNEPDP AHIVSKKLFC FADGHILDPH HVDLFCLDLL KRTYQLTIHR  120
HNESDSFSLT KVRVVSSDLV QLLEVFLLSK VRLMFLIDEE YWLLTDELNL KGTGQSHLQM  180
EVRLAFSLQN VMKSTMRYAI SHAASSRKTN SQNVKSFVVC EFENELFLDQ NADCRGKSKS  240
FIPCRSNIKL SPCRVASVVY SLYLYGEVHE DFTILGCVFD IGSSLCSSST SVKFSYRTEH  300
HSSPGHSQDY DSHGTLSLSP LLPSEESPVG CFKIAYCPQR ARLTSKSHRS PGSNKVSLNP  360
AAFLSFSYQK LKYSSGFVSS KNVFISLEVP PLRSSISRIV CYINFASSRI AKSIPILDSR  420
FTLQLGLGVK RVGVRQKQHG LSPYPDSAVF QSSSNGEMLL EAFNDNANAS NEIQEVIVDS  480
QTNIQNKRKK PSATRSLEDA SNEIQELIVD SQTNIQNKRK KPSTTQCAAS LISLEDLKQN  540
YGKKRAEAAE RFQVSVSTFK RRCREVGILR WPPVSGQKRK MKEKEADNID ESNNFEEKTS  600
TILNCTPKRQ AVDCGTKVSS CYNSTSGTTE GIYGYAVDDM DSTPMGVQLF LDSTSVQPLN  660
STSCDENSGQ KTKLLFDNLI ALPLKDLIDP ENETSMEKAL SILADNLSLF SEEQAEQILE  720
LSVDFHALVH SWRQYSQSQG RSQKSLAETE KIRDLAETSV KDEESLNVRY EELERKEQKL  780
MAQLEAVQKE KAGIAEQRNE KSKQTKHLVS LAEEKTTSTT KEKHMMKIAT TKLNTLVDQW  840
TKIQSFFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	6e-06	Nin-like family protein