PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT99161.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HD-ZIP

Protein Properties

Length: 202aa MW: 22855.6 Da PI: 6.7891

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT99161.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.1	6.1e-18	151	202	2	53
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 rk+ ++tkeq +Le+ F+++++++ +++ LAk+l+L rqV vWFqNrRa PHT99161.1 151 RKKLRLTKEQSAILEDSFKEHHTLNPKQKLALAKRLELRPRQVEVWFQNRRA 202 678899*********************************************8 PP
2	HD-ZIP_I/II	77.8	1.8e-25	151	202	1	52
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRA 52 +kk+rl+keq+++LE+sF+e+++L+p++K +la++L+l+prqv+vWFqnrRA PHT99161.1 151 RKKLRLTKEQSAILEDSFKEHHTLNPKQKLALAKRLELRPRQVEVWFQNRRA 202 69*************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MMMEKEDLGL SLSLSFPTEK RTTVINPMQQ RNLIPSTIIS PYATTSTFNL IHKSAPNWST 60 QPLFPDSSSD RNSETCRLVE TRSFLKGIDV NRMPAANGDA EEEAGVSSPN STISSLSGNK 120 RSEREANCEE NEMERASSRG ISDEEDGENC RKKLRLTKEQ SAILEDSFKE HHTLNPKQKL 180 ALAKRLELRP RQVEVWFQNR RA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17460.1	3e-48	HD-ZIP family protein