PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT99261.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 379aa MW: 42953.2 Da PI: 8.3988

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT99261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.8	9.2e-06	48	70	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C++C++ F r nL+ H r+H PHT99261.1 48 YICEICNQGFQRDQNLQMHRRRH 70 89********************9 PP
2	zf-C2H2	17.4	1.2e-05	126	147	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk + +s++k H++t+ PHT99261.1 126 ICEKCGKGYAVQSDYKAHLKTC 147 7*******************98 PP
3	zf-C2H2	11.2	0.0011	155	173	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr +++ H+ t+ PHT99261.1 155 DCGRVFSRVESFIEHQDTC 173 9***************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MLDNSSSEPL NNSAENSNRR KRRPAGTPDP DAEVVSLSPK TLLESDRYIC EICNQGFQRD 60 QNLQMHRRRH KVPWKLVKNE NPQVKKRVFV CPEPSCLHHD PCHALGDLVG IKKHFRRKHS 120 NNKQWICEKC GKGYAVQSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ DTCTVRRSIR 180 PDLQTLQPTT ACSSRTASST SPSSDTNLQK ITTMPLQHNL ELGLLPSITT TSHDQHHENH 240 HQEPHLKLSI GVSSSSQCIV PKNGQEENEV VLNLAMAERA YAEEARRHAK REMEYAEMEF 300 ANAKRIRQQA QGEIERARKL KEEAIKKISS SILEITCHAC KNKFQQNAPI ENNNNNNNIE 360 SSPAMSYMSS ATTDIEGEQ

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MLDNSSSEPL NNSAENSNRR KRRPAGTPDP DAEVVSLSPK TLLESDRYIC EICNQGFQRD  60
QNLQMHRRRH KVPWKLVKNE NPQVKKRVFV CPEPSCLHHD PCHALGDLVG IKKHFRRKHS  120
NNKQWICEKC GKGYAVQSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ DTCTVRRSIR  180
PDLQTLQPTT ACSSRTASST SPSSDTNLQK ITTMPLQHNL ELGLLPSITT TSHDQHHENH  240
HQEPHLKLSI GVSSSSQCIV PKNGQEENEV VLNLAMAERA YAEEARRHAK REMEYAEMEF  300
ANAKRIRQQA QGEIERARKL KEEAIKKISS SILEITCHAC KNKFQQNAPI ENNNNNNNIE  360
SSPAMSYMSS ATTDIEGEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-129	C2H2 family protein