PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99271.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 249aa    MW: 27405.7 Da    PI: 6.7379
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99271.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.80.001597119123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C+ C + F ++  L  H++ H
  PHT99271.1  97 FSCNFCRRKFYSSQALGGHQNAH 119
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MKPPNFNLES EEDESEVSSS QVASNISAQE ISPDPYRDST TNSSCLTKSI NLHQELKPVT  60
LDLTLGFNCS DTELKVNPEA GDEVVPHPPA APVSRIFSCN FCRRKFYSSQ ALGGHQNAHK  120
RERTLAKRAM RMGILSERYA SLASLPLHGS PYRSLGIEAH ASVHQRASQQ HERHMHAAIR  180
GGARFEQGYF GVPVYMDDDD VEMFWPGSFR QVDAVGSNVV GLNSGHLVAM APPPSRTQPP  240
SLPDLNLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.11e-43C2H2 family protein