PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT99279.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 300aa MW: 33411.9 Da PI: 7.3745

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT99279.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00018	110	132	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs++ L H++ H PHT99279.1 110 FSCNFCKREFSTSQALGGHQNAH 132 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MDVFAMKKSC SSEASSIAAT SEDSHEIITN AKKMKEKVVE VEECQLKPHV LSSSDVLLDI 60 EVHNDYKNKK NVSCLNHELN LFNSTQAGAS HESSNEATPK QNRSSDARTF SCNFCKREFS 120 TSQALGGHQN AHKQERVLGK RRNKLDDMVS LFGPTNYHPY YNPYSSFNSH APFHGSFATR 180 SLLGIQGDSS AIHKTSSYET WPFSSSYNFR SDPQKWSSSS SSSLFKTENI IGNNIHGASL 240 ENSLFTSKNN TKGFNLMDSS VNVNDNLGGK NYLKIGLGEE KAKKNNEEEE ESKLDLNLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	2e-22	C2H2 family protein