PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99321.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 89aa    MW: 9638.16 Da    PI: 8.505
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99321.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS38.81.4e-121982138200
        GRAS 138 gppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
                 ++p++RiTg +++ s+  +   +e +g+rL ++A++++vpfef++ va +++d+e+++L+v+pg 
  PHT99321.1  19 KTPRVRITGTDDSISSyaRGGGIEIVGRRLLSVAASCNVPFEFHL-VAASCSDVEIKHLNVRPGS 82 
                 68**********877788999***********************9.799************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MMEIMSRGDL KEVLIACAKT PRVRITGTDD SISSYARGGG IEIVGRRLLS VAASCNVPFE  60
FHLVAASCSD VEIKHLNVRP GSRFAPYAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.12e-19GRAS family protein