PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99768.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 117aa    MW: 13547 Da    PI: 10.8254
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99768.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.36.8e-17149556
         AP2  5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                GVr ++ + +++AeIrd + ng   r++lg+f+taeeAa  +++a+ +++g+
  PHT99768.1  1 GVRKRP-WEKYAAEIRDSTRNG--IRVWLGTFDTAEEAALTYDQAAFCMRGP 49
                9*****.**********44465..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
GVRKRPWEKY AAEIRDSTRN GIRVWLGTFD TAEEAALTYD QAAFCMRGPS ICLNFPVEKV  60
RESLTKMECS YLLQHGLMSP AAALKEKHKK RRSTSRKNKK KKKNITLLKK KDKKKMC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
189103KKRRSTSRKNKKKKK
289115KKRRSTSRKNKKKKKNITLLKKKDKKK
399111KKKKKNITLLKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.11e-35ERF family protein