PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99830.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HB-other
Protein Properties Length: 146aa    MW: 17233 Da    PI: 4.1687
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99830.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.81e-091361853
                HHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
    Homeobox 18 lFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53
                +F k + p  + +e+L+ +l+L+ +q+k+WF  +R+
  PHT99830.1  1 MFSKMPDPEDHVIEKLSGELKLDPTQIKIWFDHKRY 36
                6999*******************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MFSKMPDPED HVIEKLSGEL KLDPTQIKIW FDHKRYHIQA QRDMDENEIL RLENERLHAE  60
SLQLYSELNK RICANCNNAE QEQKILQDLQ NENTRLTEEI TRMSNMVAHF EEDPDDSDND  120
PNGTDLELRL ECNDDPNGPD LELRLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21750.22e-13HD-ZIP family protein