PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT99853.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 385aa MW: 42751.3 Da PI: 9.1324

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT99853.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	35.8	1.8e-11	270	294	2	26
G2-like 2 prlrWtpeLHerFveaveqLGGsek 26 pr+rWt++LH+rFv+ave LGG+e+ PHT99853.1 270 PRMRWTSTLHARFVHAVELLGGHER 294 9*********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MPLEGAFIET PSSTKPIPDL SLNISPPNSL DHHQNHQSGG GGRCCVSEVG ENHERLVTEF 60 SKTTGSSNCL TELSLAHPTN TTTTTITTTV TNAITNDDMT TTTRRGTFLD HLPRNPYYNN 120 HQHQYQNYSH MVQPMNQINH GVSSLDVSDG LRPIKGIPVY NHNRSFPFLA STLDKEKDPK 180 MCFYPSPSSS SSSSCSPSPY FNSRFNGISS SAYHMPHHHH HHPLPYHHHS QYGHVGGLGH 240 SHHDNIANSH SLMRSRFLPK LPTKRSMRAP RMRWTSTLHA RFVHAVELLG GHERQSDGSG 300 EDDLSTIGST GGGDRAGLCR FMDQRGGSDG SLQPEPDYPS TATHTLWSNS SRRRGSKGRP 360 KRRLLSWSVL ENGKYVDLKR TPIQA

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MPLEGAFIET PSSTKPIPDL SLNISPPNSL DHHQNHQSGG GGRCCVSEVG ENHERLVTEF  60
SKTTGSSNCL TELSLAHPTN TTTTTITTTV TNAITNDDMT TTTRRGTFLD HLPRNPYYNN  120
HQHQYQNYSH MVQPMNQINH GVSSLDVSDG LRPIKGIPVY NHNRSFPFLA STLDKEKDPK  180
MCFYPSPSSS SSSSCSPSPY FNSRFNGISS SAYHMPHHHH HHPLPYHHHS QYGHVGGLGH  240
SHHDNIANSH SLMRSRFLPK LPTKRSMRAP RMRWTSTLHA RFVHAVELLG GHERQSDGSG  300
EDDLSTIGST GGGDRAGLCR FMDQRGGSDG SLQPEPDYPS TATHTLWSNS SRRRGSKGRP  360
KRRLLSWSVL ENGKYVDLKR TPIQA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	3e-26	G2-like family protein