PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99899.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family AP2
Protein Properties Length: 250aa    MW: 27342.6 Da    PI: 8.5881
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99899.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.32.9e-1668119155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  PHT99899.1  68 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 119
                 57****************988532...5************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MIVGGYDKED KAARAYDLAA LKYWGPTATT NFPVANYAIE VEEMKHMTKQ EFIASLRRKS  60
SGFSRGASIY RGVTRHHQQG RWQARIGRVA GNKDLYLGTF ATEEEAAEAY DIAAIKFRGV  120
NAVTNFEMNR YDVEAIMKSS LPVGGTAKRL KLSLESEQKS SPSNQQLTQC NSSSSNTSSS  180
NNINFGAVPP VSAIPCGVPF DTATPAYYHH NFFPYLHPGN AGVPDTSGAV TAMPLLSSAA  240
DLYIWPHQSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65510.18e-89AP2 family protein