PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT99904.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Nin-like

Protein Properties

Length: 995aa MW: 109286 Da PI: 5.4206

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT99904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.8	5.1e-29	593	644	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ PHT99904.1 593 AEKHVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 644 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 995 aa Download sequence
MERGVGFWAF PRGQTEGLST DASTRSTNVE SFNNVMEIMN LDAYAGWCSS PSATDQMFAS 60 YATFSPINQS YAPFEGMSSV DQHTGAFPPM DVNMVVSSHD DGGEIMVFGQ NDDDQFHFVV 120 DSGDGGIGLV AERSKKSSQC GADGADMSNS MIVKSPSQPL AERMLRALAM FKESSGAGIL 180 AQVWIPMKND ENQYVLSTCE QPYLLDQALS GYREVSRKFT FDTETKPGAT PGLPGRVFSS 240 RIPEWTSNVL YYKEAEYLRV QYAVNHQVRG SIALPVFEDD ASESPCCAVL ELVTMKEKPN 300 FDLEMDHVCQ ALQAVNLRSI TPPRLDSQNL SNNQRDALAE ITDVLRAVCH AHKLPLALTW 360 IPCSVTKGDE SIRVHTRGCN ASLNEKCVLC VEDTTCYVSD KEMQGFVHAC MEHFLEEGEG 420 IVGKALQSNY PFFYPDVKEY HISEYPLVHH ARKCGLNAAV AIRLRSTFTG DDDYILEFFL 480 PISMKGSTEQ QLLLNNLSGT MQRICRSLRT VSDAELVGQG ATFGLQDGSV PCLPPIALSR 540 RNTQHTLDNN SDSVNEAPLG ASNSKSAKMH VVDSREQTTI RSRRQIEKKR STAEKHVSLS 600 VLQQYFSGSL KDAAKSIGVC PTTLKRICRQ HGISRWPSRK INKVNRSLKK IQTVLESVQG 660 VEGGLKFDPA TGGLVPAGSV IEDSDTRKNI FFPFEDVSIK NPASVFQDVV SVPSTSANNK 720 ENSMVKMEGD SYIDGNQLSQ SNDINTLSGG DKSAVMSRFC YQPKLVALES SRPTSLNAIP 780 RTDSENVSLG SFLAKQGCRR WGLNYDTLDN FDRHFTSRCS FAKAVGGDTD NKIKRDTEID 840 CDGGVIEHNQ ASSSAMTDSS NGSGSMMNGS SSSSRSRGAE KYSMVELNCG DSGSTITVKA 900 TYKEDTIRFK FELSAGCLQL YEEVAKRFKL QTGTFQLKYL DDEAEWVMLV NDADLHECLQ 960 ILDFVGGRTL KFLVRDTPCA MGSSDSSNCF LASGS

Sequence ? help Back to Top

Protein Sequence Length: 995 aa Download sequence

MERGVGFWAF PRGQTEGLST DASTRSTNVE SFNNVMEIMN LDAYAGWCSS PSATDQMFAS  60
YATFSPINQS YAPFEGMSSV DQHTGAFPPM DVNMVVSSHD DGGEIMVFGQ NDDDQFHFVV  120
DSGDGGIGLV AERSKKSSQC GADGADMSNS MIVKSPSQPL AERMLRALAM FKESSGAGIL  180
AQVWIPMKND ENQYVLSTCE QPYLLDQALS GYREVSRKFT FDTETKPGAT PGLPGRVFSS  240
RIPEWTSNVL YYKEAEYLRV QYAVNHQVRG SIALPVFEDD ASESPCCAVL ELVTMKEKPN  300
FDLEMDHVCQ ALQAVNLRSI TPPRLDSQNL SNNQRDALAE ITDVLRAVCH AHKLPLALTW  360
IPCSVTKGDE SIRVHTRGCN ASLNEKCVLC VEDTTCYVSD KEMQGFVHAC MEHFLEEGEG  420
IVGKALQSNY PFFYPDVKEY HISEYPLVHH ARKCGLNAAV AIRLRSTFTG DDDYILEFFL  480
PISMKGSTEQ QLLLNNLSGT MQRICRSLRT VSDAELVGQG ATFGLQDGSV PCLPPIALSR  540
RNTQHTLDNN SDSVNEAPLG ASNSKSAKMH VVDSREQTTI RSRRQIEKKR STAEKHVSLS  600
VLQQYFSGSL KDAAKSIGVC PTTLKRICRQ HGISRWPSRK INKVNRSLKK IQTVLESVQG  660
VEGGLKFDPA TGGLVPAGSV IEDSDTRKNI FFPFEDVSIK NPASVFQDVV SVPSTSANNK  720
ENSMVKMEGD SYIDGNQLSQ SNDINTLSGG DKSAVMSRFC YQPKLVALES SRPTSLNAIP  780
RTDSENVSLG SFLAKQGCRR WGLNYDTLDN FDRHFTSRCS FAKAVGGDTD NKIKRDTEID  840
CDGGVIEHNQ ASSSAMTDSS NGSGSMMNGS SSSSRSRGAE KYSMVELNCG DSGSTITVKA  900
TYKEDTIRFK FELSAGCLQL YEEVAKRFKL QTGTFQLKYL DDEAEWVMLV NDADLHECLQ  960
ILDFVGGRTL KFLVRDTPCA MGSSDSSNCF LASGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	0.0	Nin-like family protein