PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT99946.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 194aa    MW: 22471.4 Da    PI: 8.1909
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT99946.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR158.22.7e-181297290
        FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                 Yn+YA   GF vrk  ++k+ rn+ei++  f Cs+eg+ ++ +   ++++r+r e r gC a++k k + ++ wev +++  H+H++ 
  PHT99946.1 12 AYNSYAVAKGFGVRKGPKTKN-RNNEIIRCLFLCSCEGQFDKLSPF-QERKRQRLEYRFGCLARIKFKIS-NDMWEVCEFNDVHSHPMI 97
                5****************9999.5556*************9999888.89999****************99.9**************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MKFDSEEKSY NAYNSYAVAK GFGVRKGPKT KNRNNEIIRC LFLCSCEGQF DKLSPFQERK  60
RQRLEYRFGC LARIKFKISN DMWEVCEFND VHSHPMIEDN LRHFIQSDRK LTSATKNILD  120
SMVEAENGRK NTYNNFIDQA PAIATAVREV FPENAIGYVN GTSTEMLKRI YPIFIENKDF  180
ETTSILSYGD ASQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-11FAR1 family protein