PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU00254.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YC
Protein Properties Length: 198aa    MW: 21802.8 Da    PI: 6.5203
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU00254.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC34.15.9e-114381136
       NF-YC  1 qlksfwekq...iekatdfknhelPlarikkilkadedv 36
                qlk+ w+++   ie++td+knh++ l+rik+i+kad+dv
  PHU00254.1 43 QLKMLWNYErqeIEQDTDLKNHQISLTRIKNIMKADKDV 81
                7999999877779*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MDNNNNTHQS LAEASTTAAT VAAAAQSGAY PPQRPYDHVL QQQLKMLWNY ERQEIEQDTD  60
LKNHQISLTR IKNIMKADKD VPISRTDTFN FLVDIIPRDE VNNEGVGLGL APGGVPYYYP  120
LLGQLASGGV ILGRPAVPGT VPGVVPDVDP SMYVPHMSLQ VCIEAESRTK IREKGLFDGQ  180
RVNIPTPFLG PKERKRLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63470.21e-15NF-YC family protein