PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU00360.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 195aa    MW: 22262.9 Da    PI: 4.6805
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU00360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.7e-2061110355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr+++ +g+++AeIrd s+++ + r++lg+f+taeeAa a+++a+ +l+g
  PHU00360.1  61 YRGVRRRP-WGKYAAEIRD-STRN-SVRVWLGTFDTAEEAALAYDQAAYALHG 110
                 9*******.**********.3433.6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MDSSSFSSYS YSQYHHLGFN ENDTEDMLLL NVLSEAGENS SNNLHVDQEI NEGSLKEVAS  60
YRGVRRRPWG KYAAEIRDST RNSVRVWLGT FDTAEEAALA YDQAAYALHG TMAVLNYPME  120
IVYRSLMEME CRFEEGCSPV LALKKWHSRM KKTNKKKEQK EMSFENVLVL EDLGADYLEE  180
ILRLSEGCCD PSISC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.19e-45ERF family protein