PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU00383.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 724aa MW: 80326.3 Da PI: 4.4625

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU00383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	146.7	1.3e-45	4	131	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtd el+++yLk+k+ gkkl + e i+e++iy+v PwdLp k ++k+++ ewyfF++r++kya+g r nra ++gyWk+tgkd+ v+ ++ PHU00383.1 4 LAPGFRFHPTDVELIMYYLKRKIMGKKLLF-EGITELNIYRVAPWDLPeKcCYKSKDLEWYFFCPRERKYASGARMNRASETGYWKTTGKDRLVTY-DE 100 579**********************888.78**********95445666777*********************************9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + vg ktLvf++g+ap+g++tdW++he+++ PHU00383.1 101 KIVGSVKTLVFHEGHAPRGKRTDWLIHEFKF 131 9**************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 724 aa Download sequence
MARLAPGFRF HPTDVELIMY YLKRKIMGKK LLFEGITELN IYRVAPWDLP EKCCYKSKDL 60 EWYFFCPRER KYASGARMNR ASETGYWKTT GKDRLVTYDE KIVGSVKTLV FHEGHAPRGK 120 RTDWLIHEFK FEDKESIDAG FSQDSYVLCK VFQKSGPGPK NGAQYGAPFI EEDWDDDKIP 180 AEPCPLDVFR APPGRPDNRS KSVVTGVVDP GSTSDWPSSE LSLSPIRSSI QRSPLDEPDD 240 EELPSEPKPA NVSPISRMPS DQLDDEGVHG QSNLSNIFSP LPILPEGHCM VKPGPGPSND 300 QMCTNEMPLD EQDDEIFSLL APFTEDTSLL SAGDETKQNL ENFNQDVNAP PATLTDGNDI 360 FAGLGGIEYW EGGGQPGSDL FASDGADYSF NPMILTQDSA YMELNDLDIP LDHSADTIGT 420 GQLVASNFCA PYNSNIGLQQ PCFGSNSMGI VQDFGEHNLP MLPESYTHSQ QVNHSDMVYN 480 FQNDACQGYN AATNFSVSSY TQPEASRLDA QNLKRGVQQR KFYLSVFALC DGSFILVKAE 540 VTLGVDGCTD DALSVILGEQ RKLYSSIFAL CAGSFILVKA EVTLGVYECT YDALSVILGE 600 QSKLYSSIFA HCGGSFILVK AEVTLGVDGC TNEALSVILG SPSRTFTCGS NVDKAGFLKK 660 HDEAFYFGFS LDSIYFSHLE VSWELYQFIF LKIVLNQLQF NSSGKSFHLR LRLIYNLTML 720 CFEF

Sequence ? help Back to Top

Protein Sequence Length: 724 aa Download sequence

MARLAPGFRF HPTDVELIMY YLKRKIMGKK LLFEGITELN IYRVAPWDLP EKCCYKSKDL  60
EWYFFCPRER KYASGARMNR ASETGYWKTT GKDRLVTYDE KIVGSVKTLV FHEGHAPRGK  120
RTDWLIHEFK FEDKESIDAG FSQDSYVLCK VFQKSGPGPK NGAQYGAPFI EEDWDDDKIP  180
AEPCPLDVFR APPGRPDNRS KSVVTGVVDP GSTSDWPSSE LSLSPIRSSI QRSPLDEPDD  240
EELPSEPKPA NVSPISRMPS DQLDDEGVHG QSNLSNIFSP LPILPEGHCM VKPGPGPSND  300
QMCTNEMPLD EQDDEIFSLL APFTEDTSLL SAGDETKQNL ENFNQDVNAP PATLTDGNDI  360
FAGLGGIEYW EGGGQPGSDL FASDGADYSF NPMILTQDSA YMELNDLDIP LDHSADTIGT  420
GQLVASNFCA PYNSNIGLQQ PCFGSNSMGI VQDFGEHNLP MLPESYTHSQ QVNHSDMVYN  480
FQNDACQGYN AATNFSVSSY TQPEASRLDA QNLKRGVQQR KFYLSVFALC DGSFILVKAE  540
VTLGVDGCTD DALSVILGEQ RKLYSSIFAL CAGSFILVKA EVTLGVYECT YDALSVILGE  600
QSKLYSSIFA HCGGSFILVK AEVTLGVDGC TNEALSVILG SPSRTFTCGS NVDKAGFLKK  660
HDEAFYFGFS LDSIYFSHLE VSWELYQFIF LKIVLNQLQF NSSGKSFHLR LRLIYNLTML  720
CFEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	2e-78	NAC family protein