PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU00409.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 216aa    MW: 24253.3 Da    PI: 10.6288
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU00409.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.2e-084080954
                HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PHU00409.1 40 ARLRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 80
                699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MKEMMFKIAA MQPVDIDPAT IRKPKRRNVR ISNDPQSVAA RLRRERISEK IRILQRLVPG  60
GTKMDTASML DEAIRYVKFL KRQIRLLQSS NHHPPPAQVL VPPCPNNENW ANIVTTTKAL  120
ILGSSSTTTT VANNATTFVG NTSSDPTYEF ELPTDDREYE NRERENYGNA SAGRSGSERR  180
FDTMSLPWPF GMFGSALSSR QRGGSGSHGQ RDRESN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14146RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.17e-47bHLH family protein